SeedMe News

Presentation | 2018-10-23

Web-Based Data-Sharing Building Blocks For Researchers And Research Projects

Amit Chourasia
Presented at the HigherEd Web 2018 Conference, Sacramento, CA, Oct 23, 2018

The need for rapid data access and data sharing has become central with the rise of collaborative research in many disciplines. While several commodity file sharing products are available for general use, they are not well suited for research data, as they primarily rely on manual user interfaces to add or remove a few shared files, this is not practical for sharing large numbers of science data files, like those generated during and after computation. Instead, automated and scriptable mechanisms are required that can integrate into computation workflows to post files during and after computation jobs. Furthermore scientific data often requires support for collaborative discussion of research results, quick rough-draft visualizations to analyze the data, and support for metadata and descriptive information that can record job and compute platform characteristics, input data, job parameters, job completion status, and other provenance information. In this talk I will present and discuss capabilities of the SeedMe2 project (Stream, Encode, Explore and Disseminate My Experiments) which aims to offer web based scientific data-sharing and data management platform that cater to the unique needs of researchers and fill an important gap in Research Cyberinfrastructure. The platform is built on Drupal 8. We welcome interested folks to try, explore and configure your own data sharing website at http://sandbox.seedme.org Attendees will learn how a popular and well used content management system can be used transformed to support data sharing and data management for research and general purposes.


Tutorial | 2015-11-15

Publish visualization results to SeedMe.org from VisIt

To be presented at the the Effective HPC visualization and data analysis using VisIt tutorial at SC15. Austin, TX, Nov 15, 2015

Instructor: Amit Chourasia, San Diego Supercomputer Center, UC San Diego

TutorialWebinar | 2015-11-04

Research projects involving scientific computing are now increasingly collaborative and performed on high performance clusters. These clusters offer significant computing capacity and capability to carry out several computation and analysis in parallel or distributed manner. However, the tools and policies on clusters are single user centric and impose restrictions on how processed data and computed results can be accessed and shared with research team. Furthermore, the tools and policies vary on different clusters making the sharing process non-portable and laborious.

Webinar | 2015-08-26 to 2015-09-24

Slides and video recording for this webinar are now available at https://www.seedme.org/node/48645

Learn to easily share your research data/results via SeedMe.org.

Tutorial | 2015-08-13
Intro to SeedMe. Offered at SDSC Summer Institute, San Diego, CA, Aug 13, 2015 This tutorial was a part of the half day Scientific Visualization tutorial
Release | 2015-07-30

SeedMe.org has reached a milestone with this release, to production status. [Image: Volume renderings of a Geodynamo.]
We'd to thank our early adopters who helped with testing and feature requests.

Poster | 2015-07-29

SeedMe: A Cyberinfrastructure for Sharing Results

Amit Chourasia, Mona Wong-Barnum, David R. Nadeau and Michael L. Norman

Presented at the XSEDE 2015 conference, St. Louis, MO, Jul 29, 2015

Tutorial | 2015-07-27

Sharing transient data and preliminary results from XSEDE resources via SeedMe platform

Presented at XSEDE 2015 conference, St. Louis, MO, Jul 26-28, 2015 

Instructor: Amit ChourasiaSan Diego Supercomputer CenterUC San Diego

Overview

Tutorial | 2015-07-27

Scientific Visualization: Concept, Execution and Ubiquitous Access

Presented at the XSEDE 2015 conference, St. Louis, MO, Jul 27, 2015

This Visualization tutorial at XSEDE 2015 conference will include a session on sharing visualizations results directly from VisIt software (version 2.9.x+) which ships with SeedMe integration. See an example recipe here.

Press | 2015-05-14

Rearranging the Scientific Web: SeedMe Resource Aims to Change How Researchers Share Data

By Olivia Palid and Sally Yen

Full article - See Page 4-5

Maintenance | 2015-05-12

An error was uncovered, while applying security patches, this caused an outage from 18:00 to 21:00 PDT. The problem is being investigated further, no data was lost. If you notice any issues then please report them to us. Thanks for your patience.

--SeedMe Team

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